Refereed Publications: |
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---------- 2024 ---------- Andres, H. J., N. Soontiens, J. Penney, F. Cyr (2024). Seasonal variations of the cold intermediate layer on the Newfoundland and Labrador Shelf. Progress in Oceanography, 229(103379). 10.1016/j.pocean.2024.103379. Husson, B., B. A. Bluhm, F. Cyr, S. L. Danielson, E. Eriksen, M. Fossheim, M. Geoffroy, R. R. Hopcroft, R. B. Ingvaldsen, L. L. Jørgensen, C. Lovejoy, L. Meire, F. Mueter, R. Primicerio, M. H. Winding (2024). Borealization impacts shelf ecosystems across the Arctic. Frontiers in Environmental Science, 12(1481420). 10.3389/fenvs.2024.1481420. Normandeau, A., J.B.R Eamer, R.G. Way, E.J. Harrison, F. Cyr, C.K. Algar, J.L. Eamer, H.D. Geizer, J. Haddock, B.L. Kurylyk, N. Van Nieuwenhove, L. Pijogge, G. Philibert, K. Robert, M. Saunders, J. Tamborski and A. Limoges (2024). Evidence for subsea permafrost in subarctic Canada linked to submarine groundwater discharge. Nature Geoscience. 10.1038/s41561-024-01497-z. Dempson, J. B., T. E. Van Leeuwen, I. R. Bradbury, S. J. Lehnert, D. Coté, F. Cyr, C. Pretty and N. I. Kelly (2024), A Review of Factors Potentially Contributing to the Long-Term Decline of Atlantic Salmon in the Conne River, Newfoundland, Canada. Reviews in Fisheries Science & Aquaculture, 1–26. 10.1080/23308249.2024.2341023. Aune, M., V. Ramasco, N. Wells, M. Warren, F. Cyr, E.J. Pedersen, M. Koen-Alonso, E. Eriksen, R. Primicerio, U. Lindstrom and P. Renaud (2024), Taxonomic and functional-trait metrics track recovery of demersal fish and shrimp communities following system collapse. Frontiers in Marine Science, 11(1237573). 10.3389/fmars.2024.1237573. Robertson, M., N. Cadigan, P. Regular, M. Koen-Alonso, F. Cyr, F. Zhang and T. Eddy (2024), Testing models of increasing complexity to develop ecosystem-informed fisheries advice. Fish and Fisheries. 10.1111/faf.12820. ---------- 2023 ---------- Small, T., F. Cyr, J. McCarthy, J. Sutton, L. Bertnatchez and M. Geoffroy (2023), Strong Stratification provides a refuge for rainbow smelt larvae Osmerus mordax in a sub-arctic estuary (Lake Melville, Labrador). Estuarine, Coastal and Shelf Science. 10.1016/j.ecss.2023.108553. Mullowney D. R. J., K. D. Baker, C. S. Szuwalski, S. A. Boudreau, F. Cyr and B. A. Kaiser (2023), Sub-Arctic no more: Short- and long-term global-scale prospects for snow crab (Chionoecetes opilio) under global warming. PLOS Climate 2(10): e0000294. 10.1371/journal.pclm.0000294. Gibb, O., F. Cyr, K. Azetsu-Scott, J. Chassé, D. Childs, C-E Gabriel, P. S. Galbraith, G. Maillet, P. Pepin, S. Punshon and M. Starr (2023), Spatiotemporal variability of pH and carbonate parameters on the Canadian Atlantic Continental Shelf between 2014 and 2022, Earth System Science Data, 15, 4127–4162. 10.5194/essd-2022-460. Cyr, F., K. Lewis, D. Bélanger, P. Regular, S. Clay and E. Devred (2024), Physical controls and ecological implications of the timing of the spring phytoplankton bloom on the Newfoundland and Labrador shelf, Limnology and Oceanography Letters, 9(3), p.191-198. 10.1002/lol2.10347. von Oppeln-Bronikowski, N., B. de Young, M. Belzile, A. Comeau, F. Cyr, R. Davis, P. Emery, C. Richards, D. Hebert and J. Van Der Meer (2023), Best practices for operating underwater gliders in Atlantic Canada. Frontiers in Marine Science, 10(1108326). 10.3389/fmars.2023.1108326. Fu, Y., M. S. Lozier et al. (2023) Seasonality of the Meridional Overturning Circulation in the subpolar North Atlantic. Communication Earth and Environment, 4(181). 10.1038/s43247-023-00848-9. |
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Barrillon, S., R. Fuchs, A. A. Petrenko, C. Comby, A. Bosse, C. Yohia, J.-L. Fuda, N. Bhairy, F. Cyr, A. M. Doglioli, G. Grégori, R. Tzortzis, F. d'Ovidio and M. Thyssen (2023),
Phytoplankton reaction to an intense storm in the north-western Mediterranean Sea.
Biogeosciences, 20, 141–161.
10.5194/bg-20-141-2023.
---------- 2022 ---------- Duda Matthew P., F. Cyr, G. J. Robertson, N. Michelutti, C. Meyer-Jacob, A. Hedd, W. A. Montevecchi, L. E. Kimpe, J. M. Blais, J. P. Smol (2022), Climate oscillations drive millennial-scale changes in seabird colony size. Global Change Biology. 10.1111/gcb.16171. ---------- 2021 ---------- Tzortzis, R., A. M. Doglioli, S. Barillon, A. A. Petrenko, F. d’Ovidio, L. Izard, M. Thyssen, A. Pascual, B. Barceló-Llull, F. Cyr, M. Tedetti, N. Bhairy, P. Garreau, F. Dumas and G. Grégory (2021), Impact of moderately energetic fine-scale dynamics on the phytoplankton community structure in the western Mediterranean Sea. Biogeosciences, 18, 6455–6477. 10.5194/bg-18-6455-2021. Barceló-Llull, B., A. Pascual, A. Sánchez-Román, E. Cutolo, F. d’Ovidio, G. Fifani, E. Ser-Giacomi, S. Ruiz, E. Mason, F. Cyr, A. M. Doglioli, B. Mourre, J. T. Allen, E. Alou-Font, B. Casas, L. Díaz-Barroso, F. Dumas, L. Gómez-Navarro and C. Muñoz (2021), Fine-Scale Ocean Currents Derived From in situ Observations in Anticipation of the Upcoming SWOT Altimetric Mission. Frontiers in Marine Science, 8(679844). 10.3389/fmars.2021.679844. Murphy, M. H., A. T. Adamack and F. Cyr (2021), Identifying possible drivers of the abrupt and persistent delay in capelin spawning timing following the 1991 stock collapse in Newfoundland, Canada. ICES Journal of Marine Science. 10.1093/icesjms/fsab144. Gatti, P., J. A. D. Fisher, F. Cyr, P. S. Galbraith, D. Robert and A. Le Bris (2021), A review and tests of validation and sensitivity of geolocation models for marine fish tracking. Fish and Fisheries, 22(5), p.1041-1066. 10.1111/faf.12568. Cyr, F. and P. S. Galbraith (2021), A climate index for the Newfoundland and Labrador shelf. Earth System Science Data, 13, 1807–1828. 10.5194/essd-13-1807-2021. International Altimetry Team (2021), Altimetry for the future: Building on 25 years of progress. Advances in Space Research. 10.1016/j.asr.2021.01.022. ---------- 2020 ---------- Jutras, M., C. O. Dufour, A. Mucci, F. Cyr and D. Gilbert (2020), Temporal Changes in the Causes of the Observed Oxygen Decline in the St. Lawrence Estuary. Journal of Geophysical Research, 125. 10.1029/2020JC016577. ---------- 2019 ---------- d’Ovidio, F., A. Pascual, J. Wang, A. M. Doglioli, Z. Jing, S. Moreau, G. Grégori, S. Swart, S. Speich, F. Cyr, B. Legresy, Y. Chao, L. Fu, R. A. Morrow (2019), Frontiers in Fine-Scale in situ Studies: Opportunities During the SWOT Fast Sampling Phase. Frontiers in Marine Science, 6(168). 10.3389/fmars.2019.00168. Cyr F., M. Tedetti, F. Besson, N. Bhairy and M. Goutx (2019), A Glider-Compatible Optical Sensor for the Detection of Polycyclic Aromatic Hydrocarbons in the Marine Environment. Frontiers in Marine Science, 6(110). 10.3389/fmars.2019.00110. ---------- 2017 ---------- Cyr, F., M. Tedetti, F. Besson, L. Beguery, A. D. Doglioli, A. A. Petrenko and M. Goutx (2017). A new glider-compatible optical sensor for dissolved organic matter measurements: test case from the NW Mediterranean Sea. Frontiers in Marine Science, 4(89). 10.3389/fmars.2017.00089. ---------- 2016 ---------- Dufour, K., F. Maps, S. Plourde, P. Joly and F. Cyr (2016), Impacts of Intraguild Predation on Arctic Copepod Communities. Frontiers in Marine Science, 3(185). 10.3389/fmars.2016.00185. van Haren, H., A.A. Cimatoribus, F. Cyr and L. Gostiaux (2016), Insights from a 3D temperature sensors mooring on stratified ocean turbulence. Geophysical Research Letters, 43(9). 10.1002/2016GL068032 Cyr, F., H. van Haren, F. Mienis, G. Duineveld and D. Bourgault (2016), On the influence of cold-water coral mound size on flow hydrodynamics, and vice-versa. Geophysical Research Letters, 43(2), 775-783. doi: 10.1002/2015GL067038. Cyr, F. and H. van Haren (2016), Observations of small-scale secondary instabilities during the shoaling of internal bores on a deep-ocean slope. Journal of Physical Oceanography, 46(1), 219-231. 10.1175/JPO-D-15-0059.1. ---------- 2015 ---------- Bourgault, D and F. Cyr (2015), Hypoxia in the St. Lawrence Estuary: How a Coding Error Led to the Belief that "Physics Controls Spatial Patterns". PLoS ONE 10(9): e0138858. 10.1371/journal.pone.0138858. Cyr, F., D. Bourgault, P. S. Galbraith and M. Gosselin (2015), Turbulent nitrate fluxes in the Lower St. Lawrence Estuary, Journal of Geophysical Research - Ocean, 120, 2308-2330. 10.1002/2014JC010272. Cyr, F., D. Bourgault, and P. S. Galbraith (2015), Behavior and mixing of a cold intermediate layer near a sloping boundary, Ocean-Dynamics 65(3), 357-374. 10.1007/s10236-014-0799-1. Cyr, F. and P. Larouche (2015), Thermal fronts atlas of Canadian coastal waters, Atmosphere-Ocean, 53(2), 212-236. 10.1080/07055900.2014.986710. ---------- 2014 ---------- Bourgault, D., F. Cyr, D. Dumont and A. Carter (2014), Numerical simulations of the spread of floating passive tracer released at the Old Harry prospect, Environmental Research Letters, 9, 054001. 10.1088/1748-9326/9/5/054001. *This article appears in ERL highlights of 2014. ---------- 2012 ---------- Bourgault D., F. Cyr, P. S. Galbraith, E. Pelletier (2012), Relative importance of pelagic and sediment respiration in causing hypoxia in a deep estuary. Journal of Geophysical Research, 117. 1029/2012JC007902. ---------- 2011 ---------- Cyr, F., D. Bourgault, and P. S. Galbraith (2011), Interior versus boundary mixing of a cold intermediate layer, Journal of Geophysical Research, 116, C12029. 10.1029/2011JC007359. Bourgault, D., C. Hamel, F. Cyr, J.-E. Tremblay, P. Galbraith, D. Dumont and Y. Gratton (2011), Turbulent nitrate fluxes in the Amundsen Gulf during ice-covered conditions, Geophysical Research Letters, 38, L15602. 10.1029/2011GL047936 . |
Book Chapters: |
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[2023] López Gómez, M. A. and F. Cyr
How the COVID-19 Pandemic Gave a Stimulus to Local Seafood Consumption
In: Andrews, E. J., & Knott, C. (Eds.) 2023.
Thinking Big about Small-Scale Fisheries in Canada.
TBTI Global Publication Series, St. John's, NL, Canada.
ISBN: 978-1-7773202-9-4
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Governmental and Intergovernmental Reports on Ocean Climate: |
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---------- DFO Research Reports ---------- [2024] Cyr, F., Coyne, J., S. Snook, C. Bishop, P.S. Galbraith, N. Chen and G. Han. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2023. Canadian Technical Report of Hydrography and Ocean Sciences, 382, iv + 53 p. Link [2024] Galbraith, P.S., M. Blais, M. Lizotte, F. Cyr, D. Bélanger, B. Casault, S. Clay, C. Layton, M. Starr, J. Chassé, K. Azetsu-Scott, J. Coyne, E. Devred, C.-E. Gabriel, C.L. Johnson, G. Maillet, P. Pepin, S. Plourde, M. Ringuette, J.-L. Shaw. Oceanographic conditions in the Atlantic zone in 2023. Can. Tech. Rep. Hydrogr. Ocean Sci. 379: v + 38 p. Link [2024] Cyr, F., Coyne, J., S. Snook, C. Bishop, P.S. Galbraith, N. Chen and G. Han. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2022. Canadian Technical Report of Hydrography and Ocean Sciences, 377, iv + 54 p. Link [2024] Fisheries and oceans Canada, Canada’s Oceans Now: Atlantic Ecosystems, 2022 No. Fs23-549/4-2022E-PDF ISBN 978-0-660-48883-7 [2023] Galbraith, P.S., F. Cyr, D. Hebert, D. Brickman, J. Chassé and C. Layton. Physical Oceanography (Chapter 2). In: Bernier, R.Y., R.E. Jamieson, N.E. Kelly, C. Lafleur and D.M. Moore (Eds.). State of the Atlantic Ocean Synthesis Report. [Link] [2023] Cyr, F., M. Starr and K. Azetsu-Scott. Carbonate chemsitry, pH and dissolved oxygen (Chapter 3). In: Bernier, R.Y., R.E. Jamieson, N.E. Kelly, C. Lafleur and D.M. Moore (Eds.). State of the Atlantic Ocean Synthesis Report. [Link] [2022] Cyr, F., S. Snook, C. Bishop, P.S. Galbraith, N. Chen and G. Han. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2021. DFO Can. Sci. Advis. Sec. Res. Doc. 2022/040. iv + 48 p. [Link] [2021] Cyr, F., S. Snook, C. Bishop, P.S. Galbraith, B. Pye, N. Chen and G. Han. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2019. DFO Can. Sci. Advis. Sec. Res. Doc. 2021/017. iv + 52 p. [Link] [2020] Cyr, F., E. Colbourne, P.S. Galbraith, O. Gibb, S. Snook, C. Bishop, N. Chen, G. Han and D. Senciall. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2018. DFO Can. Sci. Advis. Sec. Res. Doc. 2020/018. iv + 48 p. [Link] [2019] Cyr, F., E. Colbourne, J. Holden, S. Snook, G. Han, N. Chen, W. Bailey, J. Higdon, S. Lewis, B. Pye and D. Senciall. Physical Oceanographic Conditions on the Newfoundland and Labrador Shelf during 2017. DFO Can. Sci. Advis. Sec. Res. Doc. 2019/051. iv + 58 p. [Link] ---------- NAFO Science Council Reports ---------- [2024] Cyr, F. and D. Bélanger. Environmental indices for NAFO subareas 0 to 4 in support of the Standing Committee on Fisheries Science (STACFIS) – 2023 update. NAFO SCR Doc. 24/012 [Link] [2024] Cyr, F., J. Coyne, P.S. Galbraith, C. Layton, D. Hebert. Environmental and Physical Oceanographic Conditions on the Eastern Canadian shelves (NAFO Sub-areas 2, 3 and 4) during 2023. NAFO SCR Doc. 24/010 [Link] [2022] Bélanger, D. and F. Cyr. Environmental indices for NAFO subareas 0 to 4 in support of the Standing Committee on Fisheries Science (STACFIS). NAFO SCR Doc. 22/021 [Link] [2022] Cyr, F., P.S. Galbraith, C. Layton, D. Hebert, N. Chen and G. Han. Environmental and Physical Oceanographic Conditions on the Eastern Canadian shelves (NAFO Sub-areas 2, 3 and 4) during 2021. NAFO SCR Doc. 22/020 [Link] [2021] Cyr, F. and D. Bélanger. Environmental indices for NAFO subareas 0 to 4 in support of the Standing Committee on Fisheries Science (STACFIS). NAFO SCR Doc. 21/023 [Link] [2021] Cyr, F., P.S. Galbraith, C. Layton, D. Hebert, N. Chen and G. Han. Environmental and Physical Oceanographic Conditions on the Eastern Canadian shelves (NAFO Sub-areas 2, 3 and 4) during 2020. NAFO SCR Doc. 21/009 [Link] [2020] Cyr, F., P.S. Galbraith, C. Layton and D. Hebert. Environmental and Physical Oceanographic Conditions on the Eastern Canadian shelves (NAFO Sub-areas 2, 3 and 4) during 2019. NAFO SCR Doc. 20/020 [Link] [2019] Cyr, F., E. Colbourne, D. Hebert, R. Pettipas, P. S. Galbraith, G. Han and S. Snook. Environmental and Physical Oceanographic Conditions during 2018 on the Eastern Canadian shelves (NAFO Sub-areas 2, 3 and 4), NAFO SCR Doc. 19/011 [Link] [2018] Colbourne, E., J. Holden, S. Snook, S. Lewis, F. Cyr, D. Senciall, W. Bailey and J. Higdon. Physical Oceanographic Environment on the Newfoundland and Labrador Shelf in NAFO Subareas 2 and 3 during 2017 NAFO SCR Doc. 18/009 [Link] ---------- ICES Cooperative Research Reports ---------- [2023] Working Group on Oceanic Hydrography. ICES Report on Ocean Climate 2021. Gonzalez-Pola, C., K.M.H. Larsen, P. Fratantoni, A. Beszczynska-Möller (Eds.). ICES Cooperative Research Reports Vol. 358 123 pp. 10.17895/ices.pub.24755574 [2022] Working Group on Oceanic Hydrography. ICES Report on Ocean Climate 2020. Gonzalez-Pola, C., K.M.H. Larsen, P. Fratantoni, A. Beszczynska-Möller (Eds.). ICES Cooperative Research Reports Vol. 356. 121 pp. 10.17895/ices.pub.19248602.v2 [2020] Working Group on Oceanic Hydrography. ICES Report on Ocean Climate 2019. Gonzalez-Pola, C., K.M.H. Larsen, P. Fratantoni, A. Beszczynska-Möller (Eds.). ICES Cooperative Research Reports Vol. 350. 136 pp. 10.17895/ices.pub.7537 [2019] Working Group on Oceanic Hydrography. ICES Report on Ocean Climate 2018. Gonzalez-Pola, C., K.M.H. Larsen, P. Fratantoni, A. Beszczynska-Möller (Eds.). ICES Cooperative Research Reports Vol. 349. 122 pp. 10.17895/ices.pub.5461 |
Collaborations on DFO fish stock assessments and other research documents: |
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[2024] Pantin, J., W. Coffey, D. Mullowney, K. Baker, F. Cyr and M. Koen-Alonso.
Assessment of Newfoundland and Labrador Snow Crab (Chionoecetes opilio) in 2021.
DFO Can. Sci. Advis. Sec. Res. Doc. 2024/055. viii + 183 p.
[Link]
[2024] Le Corre, N., K.R. Skanes, K.D. Baker, D. Sullivan, W. Coffey, F. Cyr, D. Belanger, K. Morrissey and C. Malayny. Assessment of Northern Shrimp (Pandalus borealis) and Striped Shrimp (Pandalus montagui) in Shrimp Fishing Area 4 in 2022 DFO Can. Sci. Advis. Sec. Res. Doc. 2024/036. v + 85 p. [Link] [2024] Fulton, S., W. Walkusz, S. Atchison and F. Cyr. Information to Support the Assessment of Northern Shrimp, Pandalus borealis, and Striped Shrimp, Pandalus montagui, in the Eastern and Western Assessment Zones, February 2023. DFO Can. Sci. Advis. Sec. Res. Doc. 2024/016. iv + 51 p. [Link] [2023] Pantin, J., W. Coffey, D. Mullowney, K. Baker, F. Cyr and M. Koen-Alonso. An Assessment of Newfoundland and Labrador Snow Crab (Chionoecetes opilio) in 2020. DFO Can. Sci. Advis. Sec. Res. Doc. 2023/065. viii + 188 p. [Link] [2023] Coughlan, E. J., D. R. J Mullowney, K. D. Baker and F. Cyr. An Assessment of the American Lobster (Homarus americanus) stock status in Newfoundland (LFAs 3-14c). DFO Can. Sci. Advis. Sec. Res. Doc. 2023/029. iv + 50 p. [Link] [2022] Pantin, J., D. Mullowney, W. Coffey, S. Zabihi-Seissan, F. Cyr and M. Koen-Alonso. An Assessment of Newfoundland and Labrador Snow Crab (Chionoecetes opilio) in 2019. DFO Can. Sci. Advis. Sec. Res. Doc. 2022/076. viii + 194 p. [Link] [2022] Gullage, L., V. Hayes, B. M. Neves, N. Wells, N., F. Cyr and F. J. Murillo. Avoidance and Mitigation of Coral and Sponge Species During Exploratory Drilling Activities Offshore Newfoundland and Labrador. DFO Can. Sci. Advis. Sec. Res. Doc. 2022/059. vii + 141 p. [Link] [2021] Baker, K., D. Mullowney, E. Pedersen, W. Coffey, F. Cyr and D. Belanger. An Assessment of Newfoundland and Labrador Snow Crab (Chionoecetes opilio) in 2018. DFO Can. Sci. Advis. Sec. Res. Doc. 2021/028. viii + 180 p. [Link] |
Datasets: |
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[2023] Coyne, J., F. Cyr, S. Donnet, P. S. Galbraith, M. Geoffroy, D. Hebert, C. Layton, A. Ratsimandresy, S. Snook, N. Soontiens and W. Walkucz.
Canadian Atlantic Shelf Temperature-Salinity (CASTS)
Federated Research Data Repository.
https://doi.org/10.20383/102.0739
[2023] Cyr, F., K. Lewis, D. Bélanger, P. Regular, S. Clay and E. Devred. Supporting data for: Physical controls and ecological implications of the timing of the spring phytoplankton bloom on the Newfoundland and Labrador shelf Dryad. https://doi.org/10.5061/dryad.stqjq2c7k [2022] Cyr, F. , O. Gibb, K. Azetsu-Scott, J. Chassé, P. S. Galbraith, G. Maillet, G., P. Pepin, S. Punshon, M. Starr, Ocean carbonate parameters on the Canadian Atlantic Continental Shelf. Federated Research Data Repository. https://doi.org/10.20383/102.0673 [2020] Cyr, F. and P. S. Galbraith, Newfoundland and Labrador climate index. Federated Research Data Repository. https://doi.org/10.20383/101.0301 |
Theses and student reports: |
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[2014] Cyr, F.,
Mélange turbulent dans l'estuaire maritime du Saint-Laurent, PhD thesis
[pdf]
[cover page]
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Cruise reports: |
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[2018]
BB2018 glider mission
[pdf]
[2018] PRE-SWOT cruise [link] [2017] NeXOS NOR-02 pre-demonstration [pdf] |